Proteored Multicentric Experiment 11 Phosphoproteomics ProteoRed


ProteoRed - Instituto Nacional de Proteómica Dic 12th, 2017 


Bioinformatics tools


  PIKE (Protein Information and Knowledge Extractor)
  Retrieves biological information from several databases at once, regarding to a set of proteins.
  Supports PRIDE xml files as input and also as output.
  Tool available at: http://proteo.cnb.csic.es:8080/pike/

  MIAPE Generator Tool
Allows to generate MIAPE GE, GI, MS and MSI compliant reports.

Serves as a MIAPE repository.

It also allows to compare your MIAPE documents.
 
 
Click here to enter in the ProteoRed MIAPE repository by using the MIAPE Generator tool (as a guest)
 
 
Please, login to access to the tool directly
 User
 Password


To create an account or remember your password or user name, please click here
Password for guest user: 'guest'


  MIAPE-API
The project intends to create a Java API to be able to generate, delete and store MIAPE documents.
More information at: http://www.legacy.proteored.org/MIAPE-API
 

  MIAPE Extractor Tool
The MIAPE Extractor Tool is a standalone tool that allows:
  • to automatically create MIAPE compliant reports from your standard data files (PRIDE XML, mzML, mzIdentML) and others (XTandem output xml), storing these reports in the ProteoRed MIAPE repository
  • to export your MIAPE-compliant reports to standard data files (currently to PRIDE XML).

 

More information here: http://www.legacy.proteored.org/MIAPE-Extractor
 
Link to download latest version
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